The Bioinformatics Lab製作的the bioinformatics lab
The Bioinformatics Lab
分类: 科學與醫學
听听最后一集:
Summary In this episode of the Bioinformatics Lab Podcast, Kevin Libuit and Andrew Page discuss the challenges and limitations in analyzing dengue virus genomes using bioinformatics. They highlight the importance of open-source tools, the need for better data sharing, and the complexities of virus typing compared to bacteria. The conversation emphasizes the neglected status of dengue as a pathogen and the urgent need for improved methodologies in public health. Takeaways Dengue is a small but significant virus affecting warmer climates. Current mathematical tools for dengue analysis are inadequate. Open-source tools are essential for sustainable dengue typing. Phylogenetic placement is crucial for understanding circulating strains. Different countries have unique circulating dengue types. Amplicon sequencing is a viable method for dengue analysis. Data sharing in the viral world is significantly limited. The viral taxonomy system is less organized than that of bacteria. There is a pressing need for better tools and methods for dengue research. The conversation around dengue needs to be expanded and prioritized.
以前的剧集
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46 - Ep 43: Pathogen Focus: Dengue Virus Fri, 11 Oct 2024
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45 - Ep 42: GMI 14, Barcelona, Spain Mon, 23 Sep 2024
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44 - Ep 41 Importance of Dev Environments Mon, 02 Sep 2024
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43 - Ep 40 Career Spotlight: Sharvari Narendra Fri, 02 Aug 2024
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42 - Ep 39: Bioinformatics Hackathons Fri, 12 Jul 2024
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41 - Ep 38: Workflow Infrastructure Thu, 27 Jun 2024
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40 - Ep 37: SRALite Wed, 12 Jun 2024
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39 - Ep 36: Technical Career Tracks Wed, 22 May 2024
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38 - Ep 35: Bioinformatics in the Cloud Wed, 08 May 2024
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37 - Ep 34: PHA4GE with Dr. Alan Christoffels Wed, 17 Apr 2024
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36 - Ep 33: Communicating Results in Public Health Mon, 08 Apr 2024
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35 - Ep 32: Best Practices - Pipeline Development, Part Three Mon, 01 Apr 2024
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34 - Ep 32: Best Practices - Pipeline Development, Part Two Sat, 23 Mar 2024
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33 - Ep 32: Best Practices - Pipeline Development, Part One Sat, 16 Mar 2024
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32 - Ep31: AI-Generated Images Fri, 08 Mar 2024
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31 - Ep30 Part 2: Gut-Brain Axis with Kevin Bonham, Part Two Thu, 29 Feb 2024
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30 - Ep30 Part One: Gut-Brain Axis with Kevin Bonham Thu, 29 Feb 2024
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29 - Ep29 Career Spotlight: Kevin G. Libuit Thu, 22 Feb 2024
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28 - Ep28 Food Safety Research Network Fri, 16 Feb 2024
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27 - Ep27 Science and Social Media with Emma Hodcroft Thu, 08 Feb 2024
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26 - Ep 26 Utility of Open-Source Software Thu, 01 Feb 2024
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25 - Ep 25 Containerized Software Fri, 26 Jan 2024
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24 - Ep 24 Reasons to (or not to) Pursue a PhD Mon, 22 Jan 2024
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23 - Ep 23 Benefits of Cloud Computing for Bioinformatics Fri, 12 Jan 2024
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22 - Ep 22 Bridging Bytes and Biology: The Dynamics of Team-Based Bioinformatics Software Development Sun, 07 Jan 2024
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21 - Ep 21 Science and Social Media Fri, 29 Dec 2023
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20 - Ep 20 Contextual Data Standards Sat, 23 Dec 2023
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19 - Ep 19 Foodborne Pathogens Fri, 15 Dec 2023
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18 - Ep 18 Responding to Emerging Public Health Threats Fri, 08 Dec 2023
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17 - Ep 17 Metagenomics Sat, 02 Dec 2023
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16 - Ep 16 Bioinformatics Conferences Fri, 24 Nov 2023
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15 - Ep 15 Campylobacter genomics and epidemiology Thu, 16 Nov 2023
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14 - Ep 14 The first PHA4GE conference: Harmonizing Efforts in Genomic Surveillance Fri, 10 Nov 2023
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13 - Ep 13 PHA4GE: The Public Health Alliance for Genomic Epidemiology Fri, 03 Nov 2023
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12 - Ep 12 Public Health with Terra Tue, 24 Oct 2023
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11 - Ep 11 Genomics informed pandemic policy Tue, 17 Oct 2023
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10 - Ep 10 COG-UK: Pioneering SARS-CoV-2 Sequencing during the Pandemic Tue, 10 Oct 2023
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9 - Ep 9 Update from Global Microbial Identifier Thu, 05 Oct 2023
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8 - Ep8 Global Microbial Identifier in a nutshell Fri, 22 Sep 2023
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7 - Ep 7 Technological Advancements in public health bioinformatics Wed, 20 Sep 2023
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6 - Ep 6 Regional Differences in Public Health Wed, 13 Sep 2023
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5 - Ep5 Public Health Perspective Sat, 09 Sep 2023
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4 - Ep4 AI starter kit for Bioinformaticians Tue, 22 Aug 2023
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3 - Ep3 Will we be replaced by AI robots? Tue, 15 Aug 2023
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2 - Ep2 Getting started with AI in bioinformatics Tue, 08 Aug 2023
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1 - Ep 1 A new world of Large Language Models for bioinformatics Wed, 26 Jul 2023